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Quantitative and Reproducible DNA Methylation Analysis

So you’ve been performing global methylation analyses for months and want to start validating your jaw dropping findings in a broader sample set?  We don’t blame you.

A few years ago obtaining quantitative DNA methylation information at CpG sites of interest in a larger number of samples meant a whole lot of primer design, assay optimization, and brute force.

Today using tools like EpiTYPER®, navigating through CpG islands and other areas of interest is a walk in the park with:
 

Easy Primer Design

EpiDesigner (www.epidesigner.com) is a free program that cranks out optimized sets of primers for bisulfite converted DNA. All you need to do is:

  1. Enter the sequence of your region of interest (manually, or in a batch file upload)
  2. Run Program
  3. Choose from the recommended primer sets that best suit your experimental goals
Sequenom's free EpiDesigner program cranks out optimal primer sets for bisulfite converted DNA
Sequenom's free EpiDesigner program cranks out optimal primer sets for bisulfite converted DNA
Validated EpiPanels

If the idea of incorporating another primer design program into your life isn’t that enticing, you can choose from hundreds of pre-validated primer sets with the Human and Mouse EpiPanels.

The Validated EpiPanels target many of the key regions that exhibit aberrant DNA methylation patterns in disease and development.

Sequenom’s current EpiPanels include the:

  • Human Standard EpiPanel
  • Cancer EpiPanel
  • Imprinting EpiPanel
  • Mouse Standard EpiPanel

 Download the EpiPanel content lists and check them out for yourself.

Simple Data Analysis with EpiTYPER Software

Visualizing your experimental results is straightforward with EpiTYPER Analysis Software. Intuitive buttons guide you to select your data set, while stacked display panes allow you to visualize mass spectrum, sequence information, CpG methylation status and customize the way you view your results.
 

The role of DNA methylation in gene regulation isn't black & white, so why should your analysis be?
The role of DNA methylation in gene regulation isn't black & white, so why should your analysis be?
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About Sequenom

If you've been around the lab a few years, you're probably familiar with Sequenom, and if you've been to a conference or two, you might even own a Sequenom stuffed monkey. Despite Sequenom's name, they're not a sequencing company and the MassARRAY® platform isn't for sequencing. It’s a MALDI-TOF mass spectrometer that will interrogate your regions of interest with fine-toothed comb, validating your whole genome scans for genotyping, DNA Methylation, and gene expression analysis. Who knows what you’ll find when you get up close and personal with your DNA!

 

Sequenom

3595 John Hopkins Court
San Diego, CA 92121
Phone (858) 202-9000

 

 

 

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