Novel Primate- and Tissue Specific miRNAs with Dr Isidore RigoutsosMarch 17, 2015In this interview Dr Isidore Rigoutsos discusses his recent paper ‘Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs‘ published in PNAS, February 2015. This paper shows the presence of many more miRNAs than previously thought and uncovers that the majority of these are in fact, cell-type […]
Webinar: An Engineered Synergistic CRISPR/Cas9 Activator Complex for Genome-wide Transcriptional ControlMarch 4, 2015Presenter: Silvana Konermann, Graduate Student in Dr Feng Zhang’s Lab at Massachusetts Institute of Technology Systematic interrogation of gene function requires the ability to perturb gene expression in a robust and generalizable manner. The ease and scalability of the CRISPR-Cas9 system potentially enables systematic, genome-scale perturbation, but the magnitude of transcriptional up-regulation achieved by the first generation of Cas9 transcriptional […]
Guide: Bisulfite-Converted DNA AmplificationJanuary 12, 2015Over the years, bisulfite conversion has become the most widely used method for DNA methylation analysis. It is the most convenient and effective way to map DNA methylation to individual bases. As the first step in numerous downstream analysis techniques, it is absolutely critical that the bisulfite conversion process is understood and performed well. Our […]
Webinar: A Step-by-Step Guide to ChIP-Seq Data AnalysisJanuary 12, 2015In this webinar, Dr. Xi Chen takes publicly available real ChIP-seq data sets to show you how to perform ChIP-seq routine analysis using a combination of different online tools available. This provides an opportunity for bioinformatics beginners and wet-lab biologists who do not have much experience with unix operating systems to have an idea about […]
Genome Editing TimelineDecember 18, 2014Since its inception, the field of genetic engineering has introduced DNA to plenty of nips, tucks, and modifications all in the name of science. The latest evolution of these, genome editing, might be the most promising. Follow our favorite highlights in this rapidly moving application.
Newly Evolved Ribozyme Is Proof-of-principle for the Origin of LifeDecember 13, 2014Life is complicated. While that does apply to ordering your daily caffeine fix at Starbucks, what we’re talking about here is darwinian, entropy-defying, self-replicating life. Just to store, read, and apply genetic information requires 3 different types of molecules: DNA, RNA, and proteins. That makes it tough to imagine how life could ooze into being in […]
Embryonic Stem Cell Model Highlights Importance of Histone Mutation in Childhood TumorigenesisNovember 26, 2014Childhood cancers are truly devastating diseases; they cause major loss of young lives due to the distinct lack of treatment options stemming from the limited access to tumor tissues. Hopefully, a promising new study published in Science will change this. Researchers from the laboratory Viviane Tabar at the Memorial Sloan-Kettering Cancer Center, New York, USA […]
Boosting Bone by Exercising your Stem CellsNovember 25, 2014How do you do it? Running? Boxing? Jane Fonda work out videos? Whatever the method, we all need exercise to keep our bodies and minds healthy and functional, and it now turns out that stem cells benefit from exercise too! Researchers have demonstrated that remote mechanical stimulation of transplanted mesenchymal stem cells (MSCs) is a potentially […]
A New Methylation Signature: CpG Ravines as a CpG Island Sub-TypeNovember 13, 2014Islands and shores are always on the mind at this time of the year, but just because winter is coming doesn’t mean we need to put the rest of the CpGenome on the shelf. CpG Shores might be the regulatory master of CpG Islands but new features keep emerging, like CpG Canyons, and now a new sub-type of CpG Islands is coming […]
Breaking Barriers: Cloning Made Easier by Erasing Epigenetic MarksNovember 5, 2014If Star Wars is anything to go by, cloning techniques of the future will be able to create a whole army of clones in the blink of an eye. Yet, back on planet Earth, the cloning of today is still relatively inefficient. A new study published in Cell identifies an important epigenetic road block in […]