CombiGEM Takes Combinatorial miRNA Analysis to the Next LevelSeptember 7, 2015Single gene-focused research can sometimes be like the Indian story of the blind men and the elephant. The blind men, having never seen an elephant before, decide to touch one and feel it for themselves, to determine its shape. However, since they all grab different parts of the elephant, each can only describe what they feel, […]
DNA Methyltransferase Teams Up with Long Non-Coding RNA to Police Colon Cancer CellsSeptember 5, 2015Mulder and Scully. Holmes and Watson. If TV and books are anything to go by, then unconventional pairings between the hot-headed detective and their calm and collected partner get results. Now it seems that another unlikely duo work together in the fight against crime of a biological nature. A new study reports that a DNA […]
Race, Gender and Non-Coding RNA: tRNAs Don’t Play it Politically CorrectJuly 17, 2015Human genetics just got a whole lot more complicated with a report published last week by Isidore Rigoutsos’ team in Oncotarget. As if differences in expression profiles between cells, tissues and differentiation stages weren’t already enough, it seems that race and gender also affect genomic output. Specifically, the team focused on transfer RNAs (tRNAs). tRNAs […]
CRISPR-Display: For the lncRNA Enthusiast that has EverythingJuly 6, 2015From wall hung TVs to the latest wearable; displays have been a key technology differentiator for years. Now we’d like to introduce you to CRISPR-Display, one of the latest applications of CRISPR technology for the lncRNA lover that wants to elevate their functional game. Interest in lncRNAs continues to surge, but like other uncharted areas […]
miRNA-Switches Makes Stem Cell Selection Pure and SimpleMay 28, 2015As any sports coach, hopeful lottery winner, or child in a candy store will tell you, an effective selection strategy is vitally important to a successful outcome. Selection is also an important concept for scientists and clinicians hoping to take advantage of the ability that human pluripotent stem cells (hPSCs) have to differentiate into multiple […]
Get in the Loop of Antisense Mediated Transcriptional RegulationApril 30, 2015Long non-coding RNA research isn’t just a load of HOTAIR; since their initial discovery long non-coding RNAs have revealed their importance in regulating the genome. One such insight is the observation that lncRNA express antisense transcripts, which are abundantly found either partially or completely overlapping with transcripts from the opposite strand. These have been shown […]
Novel Primate- and Tissue Specific miRNAs with Dr Isidore RigoutsosMarch 17, 2015In this interview Dr Isidore Rigoutsos discusses his recent paper ‘Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs‘ published in PNAS, February 2015. This paper shows the presence of many more miRNAs than previously thought and uncovers that the majority of these are in fact, cell-type […]
A cHi-C Way of Capturing Chromatin ConformationMarch 9, 2015Identifying cancer risk loci is like trying to find a key you lost somewhere in your apartment. You know that it’s there and by combining experience with indistinct recollection you can even narrow it down to a few square meters. Now imagine you not only have to find the key but also map all the […]
Gene Expression Comes Full CircRNAMarch 9, 2015Circular RNAs (circRNAs) are a diverse RNA species that regulate gene expression in some funky ways, like functioning as super absorbent miRNA sponges in mammalian cells. However, they also seem to be particularly relevant to the brain. Recent research adds a new function to this ‘outside of the box’ method of regulating gene expression by observing circRNAs […]
m6Ajor New Function for MicroRNAs in RNA MethylationFebruary 20, 2015It’s no secret that microRNAs are pretty busy molecules. A single microRNA can regulate the expression of several, maybe even hundreds, of transcripts. If that wasn’t enough, researchers at the Chinese Academy of Sciences, Beijing now add another function to this packed list of duties: the control of m6A RNA methylation, which is emerging as an […]