Zymo Research 5-mC and Quest™ 5-hmC ELISAs Take DNA Methylation Screens GlobalMarch 10, 2015The concept of ‘Acting Locally’ has struck a chord with many folks these days on topics ranging from groceries to government, which makes it easy to forget the last part of that meme: which is to also ‘Think Globally’. The R&D team from Zymo Research has kept that bigger picture in mind, and developed their […]
Epigenetic Sequencing Woes Overcome by Services Know-howMarch 1, 2015Sequencing technologies have created a dizzying number of opportunities for epigenetic researchers to explore questions that couldn’t be tackled before. Despite the immense power that sequencing delivers, though, the whole process still isn’t quite as simple as pushing a big red button, and watching the groundbreaking discoveries roll in. Even as sequencing becomes faster, easier, […]
Culture Shock: The Transition to Transformed Cell Alters the MethylomeFebruary 10, 2015Whether it’s making the monumental move to high school, switching jobs or experiencing the culture shock from moving countries, adjusting to a new environment isn’t always easy. Often we have to make concessions and tradeoffs, the extent of which is very much dependent on the type of environment we find ourselves in. It turns out […]
Epigenetic Clock Goes from Analog to iWatchFebruary 6, 2015Tick tock…we all know that life is a battle against the inevitability of time. But wouldn’t it be great if you could get a real idea of how your cells are aging? It may just help make 20 the new 30, that is when it comes to your chance of death. And that’s the ambitious […]
DNMT1 Depletion Helps Hunt for Heritable MethylationFebruary 5, 2015Sometimes it takes a special kind of guy to get the job done and when the job is to keep imprinted genes differentially methylated, that guy is DNMT1. An international group of researchers led by Jacquetta Trasler in Canada set out to exploit this fact in order to identify yet unknown imprinted genomic sequences. Several […]
Neurodevelopment and Methylomic Trajectories: Sex and DiseaseFebruary 4, 2015If variety is the spice to life than the brain must be the spiciest organ of them all, with DNA methylation as its rooster sauce (which comes with its own embedded sodium bisuflite conversion kit). By studying the delicious layers of DNA methylation variation we’ve seen strange parental expression biases, methylation differences between discordant twins, and how the dynamics […]
A Good Friend is Forever: DNMTs and Histone ComplexesJanuary 26, 2015It’s not always easy to find good friends, but recent work has found that the de novo DNA methyltransferases DNMT3A2 and DNMT3B1 are far from socially awkward. Baubec et al. from the Swiss team lead by Dirk Schübeler uncovered some companions of these DNMTs by profiling their binding in embryonic stem cells (ESCs) through streptavidin […]
Abcam’s Bisulfite-Seq High Sensitivity Kit Streamlines 5mC DetectionJanuary 26, 2015The new Bisulfite-Seq High Sensitivity Kit from the creative crew at Abcam, is a 2-in-1 package that weaves bisulfite conversion, and Illumina® sequencing library prep into the same process. This single kit can take you from sample DNA, to firing up a Bisulfite Sequencing (BS) run that same day. There’s No Such Thing as Too […]
Active Demethylation: TET Enzymes, 5hmC, and CompanyJanuary 20, 20155hmC was originally discovered way back in the 50’s in bacteriophages and was first observed in mammals in the 70’s, but research into this was set back when these studies failed to replicate. And going back to the future, in 2009 two independent research groups, publishing on the same pages in science, found that this “unknown […]
Why Drugs in Dad Can Affect Your EpigenomeJanuary 15, 2015Some people aren’t always happy about what gets passed on from their parents. It’s great to have your Dad’s strong cheekbones but not so great to have his lactose intolerance. It turns out we may acquire even more from our fathers than we ever thought during our germ cell years. A new study from Elizabeth Thomas’s lab […]