DNMTs Divide Their Dynamic DNA Methylation LabourNovember 27, 2014Splitting up work amongst the team is always a sound strategy for success. We’ve seen that the TET family likes to divide it’s labour and now, not so suprisingly, the ever so famous DNA methyltransferases have also been caught working smart. Researchers from the Center for Individualized Medicine at the Mayo Clinic used acute and combined depletions […]
A New Methylation Signature: CpG Ravines as a CpG Island Sub-TypeNovember 13, 2014Islands and shores are always on the mind at this time of the year, but just because winter is coming doesn’t mean we need to put the rest of the CpGenome on the shelf. CpG Shores might be the regulatory master of CpG Islands but new features keep emerging, like CpG Canyons, and now a new sub-type of CpG Islands is coming […]
In the Epitranscriptome Clusters of Co-Methylation Define m6A’s FunctionNovember 13, 2014Lately, at the EpiGenie HQ, we’ve had our mind on methylation and our money on RNA. Not just limited to DNA or Cytosine, we’ve seen that N6-methyladenosine (m6A) is a highly dynamic mark in RNA that has a critical role in stem cell differentiation. Now researchers from the Northwestern Polytechnical University in China have set out to find how m6A dynamics work on […]
in vivo CRISPR Takes Aim at Key DNA Methylation Players in the BrainOctober 31, 2014Adding to the ever growing potential of genome editing, one of the latest breakthroughs from the lab of Feng Zhang at the Broad Institute of MIT and Harvard puts CRISPR/Cas9 to the test with an interesting research trifecta of: in vivo genome editing focused on the brain genome editing that targeted DNA methylation machinery including key readers and writers. both […]
Developmental Origin of Schizophrenia-Associated DNA MethylationOctober 30, 2014Schizophrenia is one complex disease, with a number of subtypes and an origin unknown. However, despite it’s complexity, recent evidence points toward an interaction between genes and environment that are mediated by the epigenome. Further adding to the complexity is the fact that most patients are treated with powerful antipsychotics that also remodel the epigenome in […]
Natural Disasters Impact DNA MethylationOctober 16, 2014As Polar Vortex II approaches, you’ll be interested in a recent study highlighting the impact of environment stressors on the epigenome. Prenatal maternal stress exposure is known to adversely affect offspring in a number of ways, depending on the nature of the exposure, but is typically studied in common exposures like diet, alcohol, and lead. But this has left the […]
Epigram: Predicting the Human Epigenome from DNA MotifsOctober 16, 2014There’s no denying the power of technology in our lives, whether it be your latest and greatest iPhone bending in your pocket or it be getting the technology to do something more useful, like predict the entire epigenome and how it functions in the regulation of gene expression. We’ve always loved a good tool and/or […]
Maternal Care Causes Variation in Behavior and Gene Regulation in FemalesOctober 1, 2014Life experiences shape us in ways that are hard to imagine, whether it’s a catch-phrase from a favorite TV show slipping into our vocabulary ,or how much your mother licked you while you were child (We know that sounds weird for humans, but licking just happens to be a measure of maternal care in rodents). […]
Environmental enrichment stimulates neural 5hmC dynamicsSeptember 17, 2014Judging from the luxurious lifestyles of the rich and famous, it would seem there’s no denying the wonders of an enriched environment. Even at an epigenetic scale, enhancing your environment properly and with a bit of personal restraint leads to improvements in the brain aplenty, including learning and memory. A team from Emory University characterized the […]
Rewiring Stem Cell Transcriptional CircuitrySeptember 12, 2014It seems all that was needed for human stem cells to maintain their pluripotent state, was just a little transcriptional rewiring. This cellular circuitry wasn’t handled by a master electrician though, but rather a group of Cambridge area researchers. A collaboration involving the Babraham Institute, Cambridge Stem Cell Institute and the European Bioinformatics Institute, led […]
