DNA Methylation: Thinking Outside the Promoter to Determine LineageJune 9, 2009Promoters get all the glory when it comes to gene regulation. Sure, they’re important, but save a little love for enhancers—they may help cells decide what to be when they grow up! Historically, most methylation studies have focused on promoters, but instead of giving all the attention to these spotlight hogs, researchers at University Hospital […]
miRNA-Mediated Viral Attenuation Gives Vaccines a BoostJune 7, 2009With all the recent talk of swine flu and pandemics, you might be wondering how the development of new flu vaccines is coming along. In an example of impeccable timing, researchers at the Mount Sinai School of Medicine now report that they’ve attenuated, two strains of the influenza A virus, the culprit behind swine, avian, […]
Curing Transposable Elements May Sicken Nearby Coding GenesJune 4, 2009As in many aspects of life, curing the genome of transposable elements (TEs) may be a trade-off. To stop TEs from bouncing all over the genome, cells often resort to small RNA-mediated methylation. But researchers at UC Irvine have discovered that silencing TEs that settle in close to coding regions can reduce the expression of […]
What is Suppressing The Suppressors?: Modified CTCFs linked to silenced tumor suppressorsMay 20, 2009Looking for exotic enzymes to silence tumor suppressor genes? You might be searching in vain. Maybe try looking for heterochromatin instead. Salk Institute postdoc Michael Witcher was baffled by what made p16INK4a not tick in breast cancer cells. He fed the genetic sequence into some prediction software, but it wasn’t much help. So he did […]
miRNAs Driving the Evolution of the Regulatory CockpitMay 8, 2009Recent discoveries in the field of epigenetics continue to transform the “light switch” examples of gene regulation with which the 30+ crowd was schooled into something a little more complicated…like an airplane cockpit. We’re not talking your average Cessna either, more like an Airbus A380. Evidence from a number of miRNA studies have added them […]
The Ups and Downs of miR-145 and OCT4 in hESCsApril 30, 2009Human embryonic stem cells (hESCs) are delicate little creatures. Left to their own devices – especially in culture — they want to differentiate or die. By now you’ve probably heard of the intricate network of factors that allow these cells to retain their stemness – some, like the transcription factors OCT4 and SOX2, prevent differentiation […]
Fine-Tuning mRNA Deliveries with Alternative PolyadenylationApril 28, 2009The US Post Office tried it a few years back when they added those four extra digits onto our zip codes, allowing advertisers to target us with SPAM with utmost precision. At EpiGenie, we too, are always looking for simpler ways to pass along targeted information (RSS feeds, telepathy etc.,) to an ever-increasing population of […]
Polycomb and Trithorax Proteins Dominating the In CrowdApril 23, 2009At EpiGenie, we do our best to keep up with the latest research trends in the epigenetics scene so we couldn’t help but notice that lately, the Polycomb (PcG) and Trithorax (TrxG) proteins are grabbing more headlines than Octa-Mom. Deservingly so, when you consider the critical role these developmental switchboards play in maintaining expression patterns […]
Genome Sequence Affects Heterochromatin SpreadingApril 17, 2009The establishment of heterochromatin is an important way for cells to repress transcription. Yet not much is known about the control of heterochromatin spreading into euchromatic domains. Therefore, researchers at Duke University used the Awesome Power of Yeast (Epi)Genetics to study how specific DNA sequences affect heterochromatin spreading. Their results are published in the April […]
Huh? miR-96 Tied to Hearing LossApril 17, 2009Over the years, mothers around the world have routinely warned their children of the imminent hearing loss resulting from too many Iron Maiden concerts, blasting Winger too loud on car stereos, or the permanently attached iPod earbuds that come standard with adolescents nowadays, but now we have scientific data to suggest our mothers and miR-96 […]