Don’t Turn the Other Cheek on Heterogeneity in Buccal Cell SamplesMarch 12, 2019When it comes to brushing, whether it’s your teeth or a cheek swab sample, proper technique is important. Your dentist may have already told you not to brush you teeth too hard, but it turns out how you collect a cheek swab is also important. Buccal epithelial cells are perhaps the most clinically accessible tissue […]
Think Different – Alternatively Spliced Histone Variant Points to Epigenetic Control of Telomere LengtheningMarch 12, 2019While many prefer matters to be straightforward, some prefer to think “outside the box” and conjure up an alternative to the norm. Cancer cells are much the same; while most remain on the straight and narrow and employ the telomerase holoenzyme complex to maintain their telomeres, a significant fraction go their own way and use […]
EZH2 Gets a TAD Involved in CancerFebruary 26, 2019In the Venn diagram of epigenetics and cancer biology, EZH2 sits perfectly in the overlap. This methyltransferase is responsible for tri-methylation of lysine 27 on histone 3 (H3K27me3) but is also an oncogene, mutated in a variety ofhumancancers. H3K27me3 is a marker of inactive chromatin domains, specifically topologically associating domains (TADs), and has been linked to […]
When Two Is Not Better Than One: Duplicitous Dipeptides Disrupt Heterochromatin to Promote NeurodegenerationFebruary 25, 2019While some protein aficionados may believe that the only thing better than one peptide is a dipeptide, a study from the lab of Leonard Petrucelli (Mayo Clinic, USA) recently established that the expansion of double-dealing dipeptide repeats promotes the development of neurodegenerative disease via the disruption of heterochromatin structure and function. The diseases in question, […]
Orange You Glad for Methylation’s Role in Fruit Ripening?February 12, 2019If you like to start your day with a glass of orange juice, you can thank epigenetics for that. More specifically, you can thank DNA methylation, since it’s been recently shown to play a crucial role in the ripening process of the sweet orange fruit. The collaborative efforts of Jian-Kang Zhu at Purdue University (Indiana, […]
Histone Methyltransferase Loss Disconnects the Autistic BrainFebruary 12, 2019Connection and communication represent two crucial concepts in the massive and complex network that is the mammalian brain; therefore, the disruption of neural connections during early development may promote the onset of neurodevelopmental disorders. Previous studies have linked the histone methyltransferase SETD5 with autism spectrum disorders (ASD), which inspired researchers from the lab of Alysson […]
ChIP-seq SNFs Out the Epigenomic Impact of SWI/SNF Loss in Paediatric Brain TumorsFebruary 8, 2019Cancer researchers have been SNFing around the role of the SWI/SNF complex for a long time. By SWItching to a ChIP-seq approach, novel details about how biallelic loss of a key gene promotes a cancerous epigenome have been uncovered. SWI/SNF (or BAF) is a chromatin remodeling complex and a key regulator of early development that […]
Epigenetic Editing Wipes Fear Memory in a Sex-Specific MannerFebruary 4, 2019Whether it’s the sure thing you bet on for the Super Bowl or the grant that keeps escaping your grasp, some memories are best forgotten. However, memories are complicated to say the least, and with most of us left wanting to retain a few of the more enjoyable examples, a targeted editing approach would certainly help. Thankfully, new […]
Too Much Tau Over Relaxes Chromatin in Neurons in Aging and Alzheimer’s BrainsFebruary 3, 2019Taking a break can be a great thing for our aging brains, it gives us a chance to unwind and open ourselves up to new ideas. However, it’s possible to have too much of a good thing, where overly relaxed chromatin can wreak havoc on an aging neuron and drive pathological changes! One of the […]
Perturb-ATAC: Single-Cell Multiplex CRISPR Screening of Chromatin Regulatory NetworksJanuary 30, 2019Feeling perturbed by the limitations of current chromatin assays? Looking for something high throughput that combines multiplexed genome editing with single cell resolution of open chromatin? Well look no further than Perturb-ATAC. The lab of Paul Khavari (Stanford, California) sought to address the above challenges with simultaneous measurements of perturbations and chromatin state in single […]