Keep DNA Methylation Experiments in Check with These ControlsSeptember 12, 2014Specially designed DNA standards and controls may not be flashy, but they are essential for correct experimental design and successful data analysis and without that, you’re going to be struggling to nab that next big publication. But don’t worry, with the proper controls you’ll be able to pinpoint experimental issues with laser precision, not to […]
Hints for Optimizing Bisulfite Primer DesignSeptember 12, 2014The bisulfite conversion experts from Zymo Research have put together a killer guide on the ins and outs of amplifying bisulfite treated DNA. EpiGenie got an exclusive, advanced peek at some of the content that we are sharing with our readers. In this section, they provide some helpful advice on the art of bisulfite primer […]
Endogenous Retroviruses Shape the Road to Stem Cell ReprogrammingSeptember 6, 2014It’s been a while now since Yamanaka and his team discovered the recipe of everlasting youth, for cells at least. Yet, the road leading from differentiated cell to pluripotency passes through largely uncharted territory. Now, Yamanaka and colleagues show that the activation of human endogenous retroviruses is a key landmark on the induced pluripotency highway. […]
Total Histone Content Contributes to Embryonic Stem Cell PluripotencySeptember 5, 2014Histones, the powerful regulators of the nucleus that can make our genetic material expand and contract faster than interest rates on the economy, are deeply involved in stem cell differentiation dynamics. But what about the total amount of histones in a cell? Until recently researchers have viewed histone content as fairly fixed, but an Italian […]
450K Hacked: ox-BS Gives Away 5hmC’s secretsSeptember 5, 2014Differentiating between DNA’s celebrity cytosine bases can be harder than remembering all the ‘celebrities’ caught in hollywood’s latest photo leak. But have no fear, because oxidative bisulfite conversion (ox-BS) is here to save the day in a reduced representation way. Normally, bisulfite conversion doesn’t produce a difference in readout between 5mC and 5hmC, but ox-BS overcomes this by treating the DNA […]